Example d121: Muscle fibre from a volume mesh

This example creates a 1d fibre from a volume mesh of the rectus femoris muscle using the cmiss perl utilities and writes out a new IPNODE file.

The comfile run by this example is as follows:

# This comfile reads in a *.ipxi file and converts it into an    #
#   ipnode file which can be read into CMISS                     #

if( !$example ) {
	$example = ".";
}

# Specify cmiss perl module
use CmUtils::File qw(cmRead cmWrite);

# Read in the volume mesh
fem define coor 3,1
fem define node;r;$example/Volume_mesh
fem define base;r;$example/sector
fem define elem;r;$example/Volume_mesh

# Generate the data points
fem define xi;r;$example/data
fem define data;c from_xi
fem define data;w;points

# Write out the ipnode
$group = cmRead( 'points.ipdata' );
$group->offset_number(109);
cmWrite( 'fibre.ipnode', $group );

Additional testing commands:

fem list node

Files used by this example are:

Name                Modified     Size

example_d121.com    17-Dec-2003  631 
Volume_mesh.ipelem  13-Nov-2001  9.0k
Volume_mesh.ipnode  13-Nov-2001   74k
data.ipxi           13-Nov-2001  622 
fibre.ipelem        13-Nov-2001  8.0k
fibre.ipnode        17-Dec-2003  6.5k
points.ipdata       13-Nov-2001  2.9k
sector.ipbase       13-Nov-2001  6.6k
test_output.com     13-Nov-2001   14 
volume.exelem       13-Nov-2001   52k
volume.exnode       13-Nov-2001   25k

Download the entire example:

Name                           Modified     Size

examples_d_d1_d12_d121.tar.gz  19-Aug-2006   28k

Testing status by version:

Testing status by file:

• cmiss_test.log
  

  i686-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  mips-irix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc7:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  Success	cm64-debug-clear-malloc:	cmiss_test.log.retain.
  rs6000-aix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  x86_64-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.

  
  
• cmiss_test.out
  

  i686-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  mips-irix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc7:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  rs6000-aix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  x86_64-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.

  
  
• fibre.ipnode
  

  i686-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  mips-irix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc7:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  rs6000-aix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  x86_64-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.

  
  

Html last generated: Sun Mar 6 05:51:24 2016

Input last modified: Tue Mar 2 19:26:26 2004