Example b211b: Full heart slice with VCD activation

This example solves the monodomain equation using the VCD ionic current equation on a full heart slice with fibres and anisotropy. The slice is taken at x=0 through the full 3d heart. Some nodes have been moved to reduce element skewing. Grid points are at a maximum of 0.5mm spacing and an average of about 0.3mm.

The comfile run by this example is as follows:

fem define para;r;test;example

fem define node;r;test;example
fem define base;r;test;example
fem define elem;r;test;example
fem define fibr;r;test;example
fem define elem;r;test;example fibre
fem define grid;r;test;example
fem update grid geometry
fem update grid metric
fem define equa;r;test;example
fem define mate;r;test;example
fem define cell;r;test;example
fem update grid material
fem group grid external as boundary
fem define init;r;test;example
fem define solv;r;test;example
fem solve to 0
fem define win
#uncomment for graphical output
#read com;solve;example

Additional testing commands:

fem list init
fem list solv

Files used by this example are:

Name                  Modified      Size

example_b211b.com     20-Nov-2001   574 
solve.com             12-Jul-2002   943 
test.ipbase           10-Apr-2000   1.5k
test.ipcell           10-Apr-2000   2.3k
test.ipelem           10-Apr-2000   5.4k
test.ipelfb           10-Apr-2000   2.8k
test.ipequa           26-May-2003   1.5k
test.ipfibr           30-Jan-2001   6.8k
test.ipgrid           11-Mar-2003   7.5k
test.ipinit           19-Mar-2004   924 
test.ipmate           19-Mar-2004   1.7k
test.ipmate_cell_old  10-Apr-2000   4.0k
test.ipnode           10-Apr-2000  10.0k
test.ippara           12-Nov-2002   5.9k
test.ipsolv           13-Apr-2007   2.2k
test.ipsolv.old       10-Apr-2000   1.6k
test_output.com       10-Apr-2000    28 

Download the entire example:

Name                                 Modified     Size

examples_b_b2_b21_b211_b211b.tar.gz  14-Apr-2007   12k

Testing status by version:

Testing status by file:

• cmiss_test.log
  

  i686-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  mips-irix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc7:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  Success	cm64-debug-clear-malloc:	cmiss_test.log.retain.
  rs6000-aix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  x86_64-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.

  
  
• cmiss_test.out
  

  i686-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  mips-irix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc7:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  rs6000-aix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  x86_64-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.

  
  

Html last generated: Sun Mar 6 05:51:07 2016

Input last modified: Fri Apr 13 10:37:52 2007