Simple 3d cube simulation

Example b2116: Simple 3d cube simulation

This example is a simple 3d cube with one element which is solvede implicitly using the cubic ionic current model.

The comfile run by this example is as follows:

fem define para;r;cube;example

fem define coor;r;cube;example
fem define node;r;cube;example
fem define base;r;cube;example
fem define elem;r;cube;example
fem define fibr;d
fem define elem;r;cube;example fibre
fem define grid;r;cube;example
fem update grid geometry
fem update grid metric
fem group grid external as boundary
fem define equa;r;cube;example
fem define mate;r;cube;example
fem define cell;r;cube;example
fem update grid material
fem define init;r;cube;example
fem define solv;r;cube;example
fem solve to 0

#Used to view in cmgui
fem export grid;test potential offset_node 10000 surface

#New cmgui output
fem export node;3dcube
fem export elem;3dcube


# Command updated by fixcom.sh on Wed Aug 23 17:49:46 NZT 2000
# Old command: DO M=0..9
for $M ( 0..9 ) 
{

fem solve restart to $M

# Command updated by fixcom.sh on Wed Aug 23 17:49:46 NZT 2000
# Old command: fem export point;file_1//$M grid potential
fem export point;file_1$M grid potential


# Command updated by fixcom.sh on Wed Aug 23 17:49:46 NZT 2000
# Old command: fem export elem;gridfield_1//$M field
fem export elem;gridfield_1$M field


# Command updated by fixcom.sh on Wed Aug 23 17:49:46 NZT 2000
# Old command: ENDDO
}



#See draw.com to view results

Additional testing commands:

fem list grid yq index v grid 100..250

Files used by this example are:

Name                  Modified     Size

example_b2116.com     20-Nov-2001  1.2k
cube.ipbase           10-Apr-2000  2.4k
cube.ipcell           10-Apr-2000  1.7k
cube.ipcoor           10-Apr-2000  570 
cube.ipelem           10-Apr-2000  404 
cube.ipelfb           10-Apr-2000  233 
cube.ipequa           26-May-2003  1.5k
cube.ipgrid           06-Mar-2003  600 
cube.ipinit           10-Apr-2000  872 
cube.ipmate           10-Apr-2000  1.7k
cube.ipmate_cell_old  10-Apr-2000  3.5k
cube.ipnode           10-Apr-2000  1.8k
cube.ippara           12-Nov-2002  5.9k
cube.ipsolv           13-Apr-2007  1.8k
cube.ipsolv.old       10-Apr-2000  1.4k
draw.com              20-Nov-2001  2.1k
file_10.exnode        10-Apr-2000   49k
file_11.exnode        10-Apr-2000   49k
file_12.exnode        10-Apr-2000   49k
file_13.exnode        10-Apr-2000   49k
file_14.exnode        10-Apr-2000   49k
file_15.exnode        10-Apr-2000   49k
file_16.exnode        10-Apr-2000   49k
file_17.exnode        10-Apr-2000   49k
file_18.exnode        10-Apr-2000   49k
file_19.exnode        10-Apr-2000   49k
newcube.exelem        10-Apr-2000  9.2k
newcube.exnode        10-Apr-2000  2.1k
test.exelem           10-Apr-2000  128k
test_output.com       23-Apr-2001   39

Download the entire example:

Name                                 Modified     Size

examples_b_b2_b21_b211_b2116.tar.gz  14-Apr-2007   77k

Testing status by version:

	Status	Tested	Real time (s)
i686-linux
cm	Success	Sun Mar 6 00:02:13 2016	1
cm-debug	Success	Sat Mar 5 00:05:22 2016	2
mips-irix
cm	Success	Sun Aug 19 01:37:09 2007	9
cm-debug	Success	Wed Aug 15 01:40:14 2007	36
cm-debug-clear-malloc	Success	Sat Aug 18 01:49:34 2007	43
cm-debug-clear-malloc7	Success	Mon Aug 20 01:48:01 2007	43
cm64	Success	Sun Aug 19 01:38:04 2007	8
cm64-debug	Success	Tue Aug 21 01:41:43 2007	41
cm64-debug-clear-malloc	Success	Thu Apr 1 11:10:59 2004	18
rs6000-aix
cm	Success	Wed Mar 4 01:08:09 2009	2
cm-debug	Success	Mon Mar 2 01:09:12 2009	7
cm64	Success	Wed Mar 4 01:08:34 2009	2
cm64-debug	Success	Tue Mar 3 01:14:58 2009	8
x86_64-linux
cm	Success	Sun Mar 6 00:01:04 2016	0
cm-debug	Success	Sat Mar 5 00:01:42 2016	1

Testing status by file:

cmiss_test.log

i686-linux
Success	cm:	cmiss_test.log.retain.
Success	cm-debug:	cmiss_test.log.retain.
mips-irix
Success	cm:	cmiss_test.log.retain.
Success	cm-debug:	cmiss_test.log.retain.
Success	cm-debug-clear-malloc:	cmiss_test.log.retain.
Success	cm-debug-clear-malloc7:	cmiss_test.log.retain.
Success	cm64:	cmiss_test.log.retain.
Success	cm64-debug:	cmiss_test.log.retain.
Success	cm64-debug-clear-malloc:	cmiss_test.log.retain.
rs6000-aix
Success	cm:	cmiss_test.log.retain.
Success	cm-debug:	cmiss_test.log.retain.
Success	cm64:	cmiss_test.log.retain.
Success	cm64-debug:	cmiss_test.log.retain.
x86_64-linux
Success	cm:	cmiss_test.log.retain.
Success	cm-debug:	cmiss_test.log.retain.

cmiss_test.out

i686-linux
Success	cm:	ndiff test: no significant differences with generic answer.
Success	cm-debug:	ndiff test: no significant differences with generic answer.
mips-irix
Success	cm:	ndiff test: no significant differences with generic answer.
Success	cm-debug:	ndiff test: no significant differences with generic answer.
Success	cm-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
Success	cm-debug-clear-malloc7:	ndiff test: no significant differences with generic answer.
Success	cm64:	ndiff test: no significant differences with generic answer.
Success	cm64-debug:	ndiff test: no significant differences with generic answer.
Success	cm64-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
rs6000-aix
Success	cm:	ndiff test: no significant differences with generic answer.
Success	cm-debug:	ndiff test: no significant differences with generic answer.
Success	cm64:	ndiff test: no significant differences with generic answer.
Success	cm64-debug:	ndiff test: no significant differences with generic answer.
x86_64-linux
Success	cm:	ndiff test: no significant differences with generic answer.
Success	cm-debug:	ndiff test: no significant differences with generic answer.

Html last generated: Sun Mar 6 05:51:07 2016

Input last modified: Fri Apr 13 10:37:46 2007

CMISS Help / Examples / b / b2 / b21 / b211 / b2116