Example b2114: Implicit 1D branch (simple)

This example solves the monodomain equation using the cubic ionic current model implicitly. There are only 3 elements and 25 grid points in a branch arrangement.

The comfile run by this example is as follows:

fem define para;r;branch;example

fem define node;r;;example
fem define base;r;;example
fem define elem;r;;example
fem define grid;r;;example
fem update grid geom
fem update grid metric
fem group grid external as boundary
fem define equa;r;;example
fem define mate;r;;example
fem define cell;r;;example
fem update grid material
fem define init;r;;example
fem define solv;r;;example
fem define window;c
fem draw line
fem draw elem
fem draw gauss
fem solve to 5
fem dr field grid 1 zmin=-120 zmax=20 noscale

Additional testing commands:

fem list grid yq index v

Files used by this example are:

Name                    Modified     Size

example_b2114.com       20-Nov-2001  506 
branch.ipbase           10-Apr-2000  879 
branch.ipcell           10-Apr-2000  1.7k
branch.ipelem           10-Apr-2000  833 
branch.ipequa           26-May-2003  1.4k
branch.ipgrid           06-Mar-2003  640 
branch.ipinit           10-Apr-2000  482 
branch.ipmate           10-Apr-2000  1.7k
branch.ipmate_cell_old  10-Apr-2000  3.5k
branch.ipnode           10-Apr-2000  852 
branch.ippara           12-Nov-2002  5.9k
branch.ipsolv           13-Apr-2007  1.8k
branch.ipsolv.old       10-Apr-2000  1.4k
test_output.com         23-Apr-2001   25 

Download the entire example:

Name                                 Modified     Size

examples_b_b2_b21_b211_b2114.tar.gz  14-Apr-2007  6.9k

Testing status by version:

Testing status by file:

• cmiss_test.log
  

  i686-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  mips-irix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc:	cmiss_test.log.retain.
  Success	cm-debug-clear-malloc7:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  Success	cm64-debug-clear-malloc:	cmiss_test.log.retain.
  rs6000-aix
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.
  Success	cm64:	cmiss_test.log.retain.
  Success	cm64-debug:	cmiss_test.log.retain.
  x86_64-linux
  Success	cm:	cmiss_test.log.retain.
  Success	cm-debug:	cmiss_test.log.retain.

  
  
• cmiss_test.out
  

  i686-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  mips-irix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  Success	cm-debug-clear-malloc7:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug-clear-malloc:	ndiff test: no significant differences with generic answer.
  rs6000-aix
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.
  Success	cm64:	ndiff test: no significant differences with generic answer.
  Success	cm64-debug:	ndiff test: no significant differences with generic answer.
  x86_64-linux
  Success	cm:	ndiff test: no significant differences with generic answer.
  Success	cm-debug:	ndiff test: no significant differences with generic answer.

  
  

Html last generated: Sun Mar 6 05:51:06 2016

Input last modified: Fri Apr 13 10:37:42 2007