Example b2113: Explicit 1D branch (simple)

This example solves the monodomain equation using the cubic ionic current model explicitly. There are only 3 elements and 25 grid points in a branch arrangement.


The comfile run by this example is as follows:

fem define para;r;branch;example

fem define node;r;;example
fem define base;r;;example
fem define elem;r;;example
fem define grid;r;;example
fem update grid geom
fem update grid metric
fem define equa;r;;example
fem define mate;r;;example
fem define cell;r;;example
fem update grid material
fem define init;r;;example
fem define solv;r;;example
fem define window;c
fem draw line
fem draw elem
fem draw gauss
fem solve to 5
fem dr field grid 1 zmin=-120 zmax=20 noscale

Additional testing commands:

fem list grid yq index v


Files used by this example are:

Name                    Modified     Size

example_b2113.com 20-Nov-2001 470 branch.ipbase 10-Apr-2000 879 branch.ipcell 10-Apr-2000 1.7k branch.ipelem 10-Apr-2000 833 branch.ipequa 26-May-2003 1.4k branch.ipgrid 06-Mar-2003 640 branch.ipinit 10-Apr-2000 482 branch.ipmate 10-Apr-2000 1.7k branch.ipmate_cell_old 10-Apr-2000 3.5k branch.ipnode 10-Apr-2000 852 branch.ippara 12-Nov-2002 5.9k branch.ipsolv 03-Oct-2001 943 branch.ipsolv.old 10-Apr-2000 897 test_output.com 23-Apr-2001 26

Download the entire example:

Name                                 Modified     Size

examples_b_b2_b21_b211_b2113.tar.gz 19-Aug-2006 6.5k

Testing status by version:

StatusTestedReal time (s)
i686-linux
cmSuccessSun Mar 6 00:02:11 20160
cm-debugSuccessSat Mar 5 00:04:15 20161
mips-irix
cmSuccessSun Aug 19 01:26:15 20072
cm-debugSuccessWed Aug 15 01:23:38 20076
cm-debug-clear-mallocSuccessSat Aug 18 01:28:05 200712
cm-debug-clear-malloc7SuccessMon Aug 20 01:26:58 200712
cm64SuccessSun Aug 19 01:25:38 20073
cm64-debugSuccessTue Aug 21 01:20:11 20076
cm64-debug-clear-mallocSuccessThu Apr 1 11:10:35 20044
rs6000-aix
cmSuccessWed Mar 4 01:07:35 20091
cm-debugSuccessMon Mar 2 01:06:10 20091
cm64SuccessWed Mar 4 01:07:35 20091
cm64-debugSuccessTue Mar 3 01:11:57 20091
x86_64-linux
cmSuccessSun Mar 6 00:01:04 20160
cm-debugSuccessSat Mar 5 00:01:35 20161

Testing status by file:


Html last generated: Sun Mar 6 05:51:06 2016

Input last modified: Mon May 26 18:06:26 2003


CMISS Help / Examples / b / b2 / b21 / b211 / b2113